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With NLM team - check agreement on adopting translator standard gene IDs (NCBI) #76

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dosumis opened this issue Feb 20, 2025 · 0 comments

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dosumis commented Feb 20, 2025 •

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End result: All nodes should have NCBIgene ID as IRI (with correct CURIE) with list of other EquivalentIDs in a property.

Suggested strategy:

Make lookup of gene nodes
Iterate through all gene nodes in the KB - entering the ID into translator. Merge nodes if they already exist. Add EquivalentIDs for each new node. We need to preserve all existing relationships.

In future this step needs to happen at load time.

dosumis mentioned this issue

Bridging PRO, proteins, genes, transcripts #49

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