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Augmented reality

Python

Additional library SimpleITK and scikit-image are required in addition to those set up in the mphy0030 environment.

conda activate mphy0030
pip install simpleitk scikit-image numpy-stl

Then you can run the script.

cd python  
python script_ar.py  

Then use any medical image viewer to load the image and the surface model data. The 3D slicer displays it as below.

augmented_ct

MATLAB

cd matlab  
matlab -nodesktop -r script_ar