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gsnPlotNetwork() fails when stat_col has negative values, due to log-transformation #9

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JonathanUrbach opened this issue Sep 5, 2024 · 0 comments
Open

gsnPlotNetwork() fails when stat_col has negative values, due to log-transformation #9

JonathanUrbach opened this issue Sep 5, 2024 · 0 comments

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@JonathanUrbach
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IPA reports p-values as -log10 transformed p-values, which can be negative. As a result, when using them as a stat_col, gsnPlotNetwork() fails because it tries to log-transform them again, leading negative infinities. This causes an error for gsnPlotNetwork().
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@JonathanUrbach